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Cell Reports. Physical Science|January 27, 2025
A variational graph-partitioning approach to modeling protein liquid-liquid phase separationGaoyuan Wang, Jonathan Warrell, Suchen Zheng, et al.Plos One|December 4, 2024
Deep learning analysis of fMRI data for predicting Alzheimer's Disease: A focus on convolutional neural networks and model interpretabilityXiao Zhou, Sanchita Kedia, Ran Meng, et al.Nature Communications|February 7, 2020
Estimating growth patterns and driver effects in tumor evolution from individual samplesLeonidas Salichos, William Meyerson, Jonathan Warrell, et al.Nature Communications|September 12, 2020
Predicting the frequencies of drug side effectsDiego Galeano, Shantao Li, Mark Gerstein, et al.Scientific Reports|February 16, 2024
cnnImpute: missing value recovery for single cell RNA sequencing dataWenjuan Zhang, Brandon Huckaby, John Talburt, et al.Molecular Systems Biology|August 4, 2011
AlleleSeq: analysis of allele-specific expression and binding in a network frameworkJoel Rozowsky, Alexej Abyzov, Jing Wang, et al.Viruses|July 25, 2013
Identification of genes critical for resistance to infection by West Nile virus using RNA-Seq analysisFeng Qian, Lisa Chung, Wei Zheng, et al.Proceedings of the National Academy of Sciences of the United States of America|January 19, 2010
EBNA1 regulates cellular gene expression by binding cellular promotersAllon Canaan, Izhak Haviv, Alexander E Urban, et al.Trends in Genetics : TIG|August 7, 2003
Genomic analysis of gene expression relationships in transcriptional regulatory networksHaiyuan Yu, Nicholas M Luscombe, Jiang Qian, et al.BMC Bioinformatics|August 28, 2007
PARE: a tool for comparing protein abundance and mRNA expression dataEric Z Yu, Anne E Counterman Burba, Mark GersteinPageof 85