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Plos Computational Biology|January 22, 2010
Associating genes and protein complexes with disease via network propagationOron Vanunu, Oded Magger, Eytan Ruppin, et al.Bioinformatics (Oxford, England)|July 25, 2007
SPINE: a framework for signaling-regulatory pathway inference from cause-effect experimentsOved Ourfali, Tomer Shlomi, Trey Ideker, et al.Genome Medicine|November 2, 2021
A mixture model for signature discovery from sparse mutation dataItay Sason, Yuexi Chen, Mark D M Leiserson, et al.Nucleic Acids Research|June 4, 2009
TORQUE: topology-free querying of protein interaction networksSharon Bruckner, Falk Hüffner, Richard M Karp, et al.Nucleic Acids Research|January 26, 2010
Translation efficiency in humans: tissue specificity, global optimization and differences between developmental stagesYedael Y Waldman, Tamir Tuller, Tomer Shlomi, et al.Plos Computational Biology|May 30, 2013
Simultaneous identification of multiple driver pathways in cancerMark D M Leiserson, Dima Blokh, Roded Sharan, et al.Cell Systems|May 3, 2016
Metabolic Network Prediction of Drug Side EffectsItay Shaked, Matthew A Oberhardt, Nir Atias, et al.Molecular Systems Biology|July 19, 2012
INDI: a computational framework for inferring drug interactions and their associated recommendationsAssaf Gottlieb, Gideon Y Stein, Yoram Oron, et al.Biorxiv : the Preprint Server for Biology|February 9, 2026
Toward identification of common DNA repair process in mutational signaturesDamian Wójtowicz, Marcin Wierzbiński, Jan Hoinka, et al.Journal of Computational Biology : a Journal of Computational Molecular Cell Biology|April 10, 2010
Topology-free querying of protein interaction networksSharon Bruckner, Falk Hüffner, Richard M Karp, et al.Pageof 27