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Nature Protocols|May 31, 2018
Guiding biomedical clustering with ClustEvalChristian Wiwie, Jan Baumbach, Richard RöttgerBMC Systems Biology|January 17, 2009
Reliable transfer of transcriptional gene regulatory networks between taxonomically related organismsJan Baumbach, Sven Rahmann, Andreas TauchNature Methods|September 22, 2015
Comparing the performance of biomedical clustering methodsChristian Wiwie, Jan Baumbach, Richard RöttgerMethods in Molecular Biology (Clifton, N.J.)|July 22, 2018
Online Interactive Microbial Classification and Geospatial Distributional Analysis Using BioAtlasJesper Lund, Qihua Tan, Jan BaumbachOncogene|July 3, 2026
Aberrant splicing in human cancer shows possible functional impact on transcription factorsKhalique Newaz, Olga Tsoy, Jan BaumbachBriefings in Bioinformatics|December 17, 2008
Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networksJan Baumbach, Andreas Tauch, Sven RahmannJournal of Integrative Bioinformatics|April 9, 2010
Efficient online transcription factor binding site adjustment by integrating transitive graph projection with MoRAine 2.0Tobias Wittkop, Sven Rahmann, Jan BaumbachNucleic Acids Research|May 2, 2017
Interactive microbial distribution analysis using BioAtlasJesper Beltoft Lund, Markus List, Jan BaumbachFrontiers in Genetics|February 17, 2022
KeyPathwayMineR: De Novo Pathway Enrichment in the R EcosystemKonstantinos Mechteridis, Michael Lauber, Jan Baumbach, et al.IEEE/ACM Transactions on Computational Biology and Bioinformatics|May 16, 2012
How little do we actually know? On the size of gene regulatory networksRichard Röttger, Ulrich Rückert, Jan Taubert, et al.Pageof 339