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Shane Neph

Showing results (1-10 of 28) with videos related to

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Nucleic Acids Research|July 18, 2006
MicroFootPrinter: a tool for phylogenetic footprinting in prokaryotic genomesShane Neph, Martin Tompa
Methods in Molecular Biology (Clifton, N.J.)|March 24, 2016
Operating on Genomic Ranges Using BEDOPSShane Neph, Alex P Reynolds, M Scott Kuehn, et al.
Cell|September 11, 2012
Circuitry and dynamics of human transcription factor regulatory networksShane Neph, Andrew B Stergachis, Alex Reynolds, et al.
Plos Computational Biology|July 10, 2007
A computational pipeline for high- throughput discovery of cis-regulatory noncoding RNA in prokaryotesZizhen Yao, Jeffrey Barrick, Zasha Weinberg, et al.
Biorxiv : the Preprint Server for Biology|April 1, 2025
Integrating Single-Molecule Sequencing and Deep Learning to Predict Haplotype-Specific 3D Chromatin Organization in a Mendelian ConditionDanilo Dubocanin, Anna Kalygina, J Matthew Franklin, et al.
Genome Research|September 8, 2012
Personal and population genomics of human regulatory variationBenjamin Vernot, Andrew B Stergachis, Matthew T Maurano, et al.
Bioinformatics (Oxford, England)|June 5, 2019
eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic dataCharles E Breeze, Alex P Reynolds, Jenny van Dongen, et al.
Nature Methods|March 24, 2009
Global mapping of protein-DNA interactions in vivo by digital genomic footprintingJay R Hesselberth, Xiaoyu Chen, Zhihong Zhang, et al.
Bioinformatics (Oxford, England)|May 12, 2012
BEDOPS: high-performance genomic feature operationsShane Neph, M Scott Kuehn, Alex P Reynolds, et al.
Cell|August 23, 2011
The human mitochondrial transcriptomeTim R Mercer, Shane Neph, Marcel E Dinger, et al.
Pageof 3

Showing results (1-10 of 28) with videos related to

Sort By:
Pageof 3
Nucleic Acids Research|July 18, 2006
MicroFootPrinter: a tool for phylogenetic footprinting in prokaryotic genomesShane Neph, Martin Tompa
Methods in Molecular Biology (Clifton, N.J.)|March 24, 2016
Operating on Genomic Ranges Using BEDOPSShane Neph, Alex P Reynolds, M Scott Kuehn, et al.
Cell|September 11, 2012
Circuitry and dynamics of human transcription factor regulatory networksShane Neph, Andrew B Stergachis, Alex Reynolds, et al.
Plos Computational Biology|July 10, 2007
A computational pipeline for high- throughput discovery of cis-regulatory noncoding RNA in prokaryotesZizhen Yao, Jeffrey Barrick, Zasha Weinberg, et al.
Biorxiv : the Preprint Server for Biology|April 1, 2025
Integrating Single-Molecule Sequencing and Deep Learning to Predict Haplotype-Specific 3D Chromatin Organization in a Mendelian ConditionDanilo Dubocanin, Anna Kalygina, J Matthew Franklin, et al.
Genome Research|September 8, 2012
Personal and population genomics of human regulatory variationBenjamin Vernot, Andrew B Stergachis, Matthew T Maurano, et al.
Bioinformatics (Oxford, England)|June 5, 2019
eFORGE v2.0: updated analysis of cell type-specific signal in epigenomic dataCharles E Breeze, Alex P Reynolds, Jenny van Dongen, et al.
Nature Methods|March 24, 2009
Global mapping of protein-DNA interactions in vivo by digital genomic footprintingJay R Hesselberth, Xiaoyu Chen, Zhihong Zhang, et al.
Bioinformatics (Oxford, England)|May 12, 2012
BEDOPS: high-performance genomic feature operationsShane Neph, M Scott Kuehn, Alex P Reynolds, et al.
Cell|August 23, 2011
The human mitochondrial transcriptomeTim R Mercer, Shane Neph, Marcel E Dinger, et al.
Pageof 3