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Biochimie|November 6, 2021
Human transcriptional gene regulatory network compiled from 14 data resourcesVijaykumar Yogesh Muley, Rainer KönigMethods in Molecular Biology (Clifton, N.J.)|July 12, 2021
Mathematical Programming for Modeling Expression of a Gene Using Gurobi Optimizer to Identify Its Transcriptional RegulatorsVijaykumar Yogesh MuleyMethods in Molecular Biology (Clifton, N.J.)|October 6, 2023
Prediction and Analysis of Transcription Factor Binding Sites: Practical Examples and Case Studies Using R ProgrammingVijaykumar Yogesh MuleyMethods in Molecular Biology (Clifton, N.J.)|October 6, 2023
Deep Learning for Predicting Gene Regulatory Networks: A Step-by-Step Protocol in RVijaykumar Yogesh MuleyMethods in Molecular Biology (Clifton, N.J.)|July 12, 2021
Mathematical Linear Programming to Model MicroRNAs-Mediated Gene Regulation Using Gurobi OptimizerVijaykumar Yogesh MuleyMethods in Molecular Biology (Clifton, N.J.)|July 14, 2023
Centrality Analysis of Protein-Protein Interaction Networks Using RVijaykumar Yogesh MuleyMethods in Molecular Biology (Clifton, N.J.)|July 14, 2023
Search, Retrieve, Visualize, and Analyze Protein-Protein Interactions from Multiple Databases: A Guide for Experimental BiologistsVijaykumar Yogesh MuleyPlos One|July 31, 2012
Effect of reference genome selection on the performance of computational methods for genome-wide protein-protein interaction predictionVijaykumar Yogesh Muley, Akash RanjanPlos One|January 26, 2013
Evaluation of physical and functional protein-protein interaction prediction methods for detecting biological pathwaysVijaykumar Yogesh Muley, Akash RanjanComputational and Structural Biotechnology Journal|December 25, 2025
Transcriptional coordination between intergenic RNA polymerase II-bound regions and nearby genes reveals functional specialization and disease associations in peripheral bloodVijaykumar Yogesh Muley, Andrée Delahaye-DuriezPageof 12