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Nucleic Acids Research|November 11, 1999
Improved microbial gene identification with GLIMMERA L Delcher, D Harmon, S Kasif, et al.Gene|October 31, 1998
Skewed oligomers and origins of replicationS L Salzberg, A J Salzberg, A R Kerlavage, et al.Genome Research|October 10, 2001
Understanding the adaptation of Halobacterium species NRC-1 to its extreme environment through computational analysis of its genome sequenceS P Kennedy, W V Ng, S L Salzberg, et al.Nucleic Acids Research|September 13, 2000
An optimized protocol for analysis of EST sequencesF Liang, I Holt, G Pertea, et al.Nature Genetics|June 3, 2000
Gene index analysis of the human genome estimates approximately 120,000 genesF Liang, I Holt, G Pertea, et al.Journal of Molecular Biology|August 5, 2000
Prediction of transcription terminators in bacterial genomesM D Ermolaeva, H G Khalak, O White, et al.Nucleic Acids Research|May 15, 1999
Alignment of whole genomesA L Delcher, S Kasif, R D Fleischmann, et al.Nature Protocols|August 26, 2016
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and BallgownMihaela Pertea, Daehwan Kim, Geo M Pertea, et al.Genome Biology|December 18, 2019
Transcriptome assembly from long-read RNA-seq alignments with StringTie2Sam Kovaka, Aleksey V Zimin, Geo M Pertea, et al.Nature Biotechnology|February 19, 2015
StringTie enables improved reconstruction of a transcriptome from RNA-seq readsMihaela Pertea, Geo M Pertea, Corina M Antonescu, et al.Pageof 5