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Bioinformatics (Oxford, England)|February 12, 2013
Quantifying spatial relationships from whole retinal imagesBrian E Ruttenberg, Gabriel Luna, Geoffrey P Lewis, et al.Bioinformatics (Oxford, England)|March 5, 2013
ChIP-PED enhances the analysis of ChIP-seq and ChIP-chip dataGeorge Wu, Jason T Yustein, Matthew N McCall, et al.Bioinformatics (Oxford, England)|November 30, 2012
READSCAN: a fast and scalable pathogen discovery program with accurate genome relative abundance estimationRaeece Naeem, Mamoon Rashid, Arnab PainBioinformatics (Oxford, England)|November 27, 2012
Bioclipse-R: integrating management and visualization of life science data with statistical analysisOla Spjuth, Valentin Georgiev, Lars Carlsson, et al.Bioinformatics (Oxford, England)|April 3, 2013
PathVisio-Faceted Search: an exploration tool for multi-dimensional navigation of large pathwaysJake Y Fried, Martijn P van Iersel, Mirit I Aladjem, et al.Bioinformatics (Oxford, England)|April 19, 2013
Cytoscape app storeSamad Lotia, Jason Montojo, Yue Dong, et al.Bioinformatics (Oxford, England)|April 20, 2013
INstruct: a database of high-quality 3D structurally resolved protein interactome networksMichael J Meyer, Jishnu Das, Xiujuan Wang, et al.Bioinformatics (Oxford, England)|April 23, 2013
APP2: automatic tracing of 3D neuron morphology based on hierarchical pruning of a gray-weighted image distance-treeHang Xiao, Hanchuan PengBioinformatics (Oxford, England)|April 23, 2013
rRNA:mRNA pairing alters the length and the symmetry of mRNA-protected fragments in ribosome profiling experimentsPatrick B F O'Connor, Gene-Wei Li, Jonathan S Weissman, et al.Bioinformatics (Oxford, England)|June 5, 2013
Relating genes to function: identifying enriched transcription factors using the ENCODE ChIP-Seq significance toolRaymond K Auerbach, Bin Chen, Atul J ButtePageof 1,927