Josephine Yates
7PUBLICATIONS
37CO-AUTHORS
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Publications (7)
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|Mar 27, 2026
SpatialFusion: A lightweight multimodal foundation model for pathway-informed spatial niche mapping.Josephine Yates, Mitra Shavakhi, Toni K Choueiri
|Nov 13, 2025
CanSig Benchmarks Methods for Reproducible Cancer Cell State Discovery from Single-Cell Transcriptomic Data.Florian Barkmann, Josephine Yates, Paweł Czyż
|Aug 28, 2025
MIRO2-mediated mitochondrial transfer from cancer cells induces cancer-associated fibroblast differentiation.Michael Cangkrama, Huan Liu, Xiaoyu Wu
|Sep 04, 2024
Cell states and neighborhoods in distinct clinical stages of primary and metastatic esophageal adenocarcinoma.Josephine Yates, Camille Mathey-Andrews, Jihye Park
|Jun 19, 2023
scROSHI: robust supervised hierarchical identification of single cells.Michael Prummer, Anne Bertolini, Lars Bosshard
|May 19, 2021
Finding commonalities in rare diseases through the undiagnosed diseases network.Josephine Yates, Alba Gutiérrez-Sacristán, Vianney Jouhet
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Frequent Collaborators
4 joint publications
Valentina Boeva
2 joint publications
Eliezer Van Allen
2 joint publications
Agnieszka Kraft
1 joint publications
Alexander Yermanos
1 joint publications
Chrysa Papadopoulou
1 joint publications
Jiami Han
1 joint publications
Cédric Weber
1 joint publications
Vianney Jouhet
1 joint publications
Paul Avillach
1 joint publications
Caroline Uhler
