Lore Depuydt
6PUBLICATIONS
10CO-AUTHORS
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Publications (6)
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|Dec 15, 2025
KeBaB: k-mer based breaking for finding long MEMs.Nathaniel K Brown, Lore Depuydt, Mohsen Zakeri
|Aug 12, 2025
b-move: faster lossless approximate pattern matching in a run-length compressed index.Lore Depuydt, Luca Renders, Simon Van de Vyver
|Mar 10, 2025
Run-length compressed metagenomic read classification with SMEM-finding and tagging.Lore Depuydt, Omar Y Ahmed, Jan Fostier
|Nov 28, 2024
b-move: Faster Lossless Approximate Pattern Matching in a Run-Length Compressed Index.Lore Depuydt, Luca Renders, Simon Van de Vyver
|Sep 30, 2024
Lossless Approximate Pattern Matching: Automated Design of Efficient Search Schemes.Luca Renders, Lore Depuydt, Sven Rahmann
|Jun 10, 2024
b-move: faster bidirectional character extensions in a run-length compressed index.Lore Depuydt, Luca Renders, Simon Van de Vyver
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Frequent Collaborators
5 joint publications
Jan Fostier
4 joint publications
Luca Renders
4 joint publications
Travis Gagie
3 joint publications
Simon Van de Vyver
2 joint publications
Ben Langmead
1 joint publications
Sven Rahmann
1 joint publications
Omar Y Ahmed
1 joint publications
Nathaniel K Brown
1 joint publications
Mohsen Zakeri
1 joint publications
Travis Gagie
