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Jan Fostier

15PUBLICATIONS
15CO-AUTHORS
Sequence analysisComputational complexity and computabilityGene expression (incl. microarray and other genome-wide approaches)Evolutionary computationBioinformatic methods development
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Journal

Publications (15)

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|Aug 12, 2025
b-move: faster lossless approximate pattern matching in a run-length compressed index.

Lore Depuydt, Luca Renders, Simon Van de Vyver

|Mar 10, 2025
Run-length compressed metagenomic read classification with SMEM-finding and tagging.

Lore Depuydt, Omar Y Ahmed, Jan Fostier

|Feb 12, 2025
ELLIPSIS: robust quantification of splicing in scRNA-seq.

Marie Van Hecke, Niko Beerenwinkel, Thibault Lootens

|Nov 28, 2024
b-move: Faster Lossless Approximate Pattern Matching in a Run-Length Compressed Index.

Lore Depuydt, Luca Renders, Simon Van de Vyver

|Sep 30, 2024
Lossless Approximate Pattern Matching: Automated Design of Efficient Search Schemes.

Luca Renders, Lore Depuydt, Sven Rahmann

|Jun 10, 2024
b-move: faster bidirectional character extensions in a run-length compressed index.

Lore Depuydt, Luca Renders, Simon Van de Vyver

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Frequent Collaborators

5 joint publications

Lore Depuydt

4 joint publications

Luca Renders

4 joint publications

Travis Gagie

3 joint publications

Kathleen Marchal

3 joint publications

Simon Van de Vyver

1 joint publications

Bernard De Baets

1 joint publications

Nele Vandersickel

1 joint publications

Giles Miclotte

1 joint publications

Charlotte Herzeel

1 joint publications

Roel Wuyts

Frequent Collaborators

5 joint publications

Lore Depuydt

4 joint publications

Luca Renders

4 joint publications

Travis Gagie

3 joint publications

Kathleen Marchal

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