Krzysztof H Banecki

6PUBLICATIONS
13CO-AUTHORS
Genome structure and regulationData structures and algorithmsEpigenetics (incl. genome methylation and epigenomics)Structural biology (incl. macromolecular modelling)
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Publications (6)

|Jun 22, 2026
RepliSage: a stochastic graph-based framework for 3D chromatin modeling across the cell cycle.

|Apr 08, 2026
Simultaneous modeling of chromatin conformation changes from multiple single-cell interaction maps with ChromMovie.

Krzysztof H Banecki, Haoxi Chai, Yijun Ruan

|Jun 06, 2025
ChromMovie: A Molecular Dynamics Approach for Simultaneous Modeling of Chromatin Conformation Changes from Multiple Single-Cell Hi-C Maps.

Krzysztof H Banecki, Haoxi Chai, Yijun Ruan

|Apr 29, 2025
Tri-omic single-cell mapping of the 3D epigenome and transcriptome in whole mouse brains throughout the lifespan.

Haoxi Chai, Xingyu Huang, Guangzhou Xiong

|Apr 16, 2025
Chromatin as a Coevolutionary Graph: Modeling the Interplay of Replication with Chromatin Dynamics.

Sevastianos Korsak, Krzysztof H Banecki, Karolina Buka

|Mar 14, 2025
Improved cohesin HiChIP protocol and bioinformatic analysis for robust detection of chromatin loops and stripes.

Karolina Buka, Zofia Parteka-Tojek, Abhishek Agarwal

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Frequent Collaborators

7 joint publications

Dariusz Plewczynski

5 joint publications

Yijun Ruan

3 joint publications

Karolina Buka

3 joint publications

Piotr J Górski