Sudeep Sarma

8PUBLICATIONS
17CO-AUTHORS
Computational methods in fluid flow, heat and mass transfer (incl. computational fluid dynamics)Cheminformatics and quantitative structure-activity relationshipsStochastic analysis and modellingProteins and peptidesCancer therapy (excl. chemotherapy and radiation therapy)
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Publications (8)

|Dec 15, 2025
Can We Extract Physics-like Energies from Generative Protein Diffusion Models?

Sudeep Sarma, Harrison Truscott, Da Xu

|Sep 22, 2025
Docking With Rosetta and Deep Learning Approaches in CAPRI Rounds 47-55.

Ameya Harmalkar, Lee-Shin Chu, Samuel W Canner

|Oct 10, 2024
Unified Sampling and Ranking for Protein Docking with DFMDock.

Lee-Shin Chu, Sudeep Sarma, Jeffrey J Gray

|Jul 22, 2024
Design of parallel 𝛽-sheet nanofibrils using Monte Carlo search, coarse-grained simulations, and experimental testing.

Sudeep Sarma, Tarunya Rao Sudarshan, Van Nguyen

|Aug 26, 2023
Design of 8-mer peptides that block Clostridioides difficile toxin A in intestinal cells.

Sudeep Sarma, Carly M Catella, Ellyce T San Pedro

|Jan 30, 2023
Sequence patterns and signatures: Computational and experimental discovery of amyloid-forming peptides.

Xingqing Xiao, Alicia S Robang, Sudeep Sarma

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Frequent Collaborators

5 joint publications

Xingqing Xiao

5 joint publications

Carol K Hall

3 joint publications

Lee-Shin Chu

3 joint publications

Jeffrey J Gray