Lee-Shin Chu

7PUBLICATIONS
12CO-AUTHORS
Sequence analysisComputational methods in fluid flow, heat and mass transfer (incl. computational fluid dynamics)Biomolecular modelling and designCheminformatics and quantitative structure-activity relationshipsStochastic analysis and modelling
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Publications (7)

|Jun 22, 2026
ProtAff: Protein Binding Affinity Prediction via LoRA-Finetuned ESM-2.

|Dec 15, 2025
Can We Extract Physics-like Energies from Generative Protein Diffusion Models?

Sudeep Sarma, Harrison Truscott, Da Xu

|Dec 11, 2025
Adapting Co-Folding Models for Structure-Based Protein-Protein Docking Through Flow Matching.

Da Xu, Lee-Shin Chu, Jeffrey J Gray

|Sep 22, 2025
Docking With Rosetta and Deep Learning Approaches in CAPRI Rounds 47-55.

Ameya Harmalkar, Lee-Shin Chu, Samuel W Canner

|Oct 10, 2024
Unified Sampling and Ranking for Protein Docking with DFMDock.

Lee-Shin Chu, Sudeep Sarma, Jeffrey J Gray

|Dec 26, 2023
Flexible protein-protein docking with a multitrack iterative transformer.

Lee-Shin Chu, Jeffrey A Ruffolo, Ameya Harmalkar

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Frequent Collaborators

7 joint publications

Jeffrey J Gray

3 joint publications

Sudeep Sarma

2 joint publications

Da Xu

1 joint publications

Jeffrey A Ruffolo