Mihaela Pertea

20PUBLICATIONS
197CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Genomics and transcriptomicsFormal methods for softwareGenomicsPhylogeny and comparative analysis
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Publications (20)

|Jul 03, 2026
Efficient evidence-based genome annotation with EviAnn.

|May 19, 2026
StringTie3 improves total RNA-seq assembly by resolving nascent and mature transcripts.

|Feb 17, 2026
Annotating genomes at increased scale and resolution.

Hyun Joo Ji, Mihaela Pertea, Steven L Salzberg

|Oct 30, 2025
OpenSpliceAI provides an efficient modular implementation of SpliceAI enabling easy retraining across nonhuman species.

Kuan-Hao Chao, Alan Mao, Anqi Liu

|Jun 12, 2025
StringTie3 Improves Total RNA-seq Assembly by Resolving Nascent and Mature Transcripts.

Ida Shinder, Geo Pertea, Richard Hu

|Apr 01, 2025
OpenSpliceAI: An efficient, modular implementation of SpliceAI enabling easy retraining on non-human species.

Kuan-Hao Chao, Alan Mao, Anqi Liu

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Frequent Collaborators

11 joint publications

Steven L Salzberg

4 joint publications

Alan Mao

4 joint publications

Kuan-Hao Chao

3 joint publications

Ales Varabyou