Antisense oligonucleotides inhibit intercellular adhesion molecule 1 expression by two distinct mechanisms
M Y Chiang1, H Chan, M A Zounes
1Department of Molecular and Cellular Biology and Medicinal Chemistry, ISIS Pharmaceuticals, Carlsbad, California 92008.
Insights
Two antisense oligonucleotides, ISIS 1570 and ISIS 1939, effectively inhibit intercellular adhesion molecule 1 (ICAM-1) expression post-transcriptionally. ISIS 1939 reduces ICAM-1 mRNA via RNase H, while ISIS 1570 inhibits ICAM-1 function through a different mechanism.
Area of Science:
- Molecular Biology
- Immunology
- Cell Biology
Background:
- Intercellular adhesion molecule 1 (ICAM-1) is a cell surface glycoprotein crucial for leukocyte emigration from vasculature.
- ICAM-1 expression is upregulated by inflammatory cytokines like interleukin-1 beta, tumor necrosis factor alpha, and interferon gamma in endothelial and carcinoma cells.
Purpose of the Study:
- To investigate the efficacy of phosphorothioate antisense oligonucleotides in inhibiting ICAM-1 expression.
- To elucidate the mechanisms of action for two specific oligonucleotides, ISIS 1570 and ISIS 1939, targeting ICAM-1 mRNA.
Main Methods:
- Utilized enzyme-linked immunosorbent assay (ELISA) to measure ICAM-1 expression.
- Employed immunoprecipitation of radiolabeled proteins to confirm specific inhibition.
- Assessed ICAM-1 mRNA levels and gene transcription rates.
- Investigated RNase H-dependent and -independent mechanisms using 2'-O-Methyl phosphorothioate analogs.
- Evaluated the impact of oligonucleotide treatment on HL-60 cell adherence to endothelial cells.
Main Results:
- Both ISIS 1570 and ISIS 1939 significantly inhibited ICAM-1 expression post-transcriptionally without affecting gene transcription.
- ISIS 1939 reduced ICAM-1 mRNA levels, suggesting an RNase H-dependent mechanism.
- ISIS 1570 inhibited ICAM-1 expression and function without altering mRNA levels, indicating a distinct mechanism.
- Oligonucleotide activity was sequence-specific and blocked by sense strand hybridization.
- Both oligonucleotides effectively reduced HL-60 cell adherence to endothelial cell monolayers.
Conclusions:
- Antisense oligonucleotides targeting ICAM-1 mRNA offer a viable strategy for modulating ICAM-1-mediated cellular interactions.
- ISIS 1939 acts via RNase H-dependent degradation of ICAM-1 mRNA, while ISIS 1570 employs a different post-transcriptional mechanism.
- The inhibition of ICAM-1 expression by these oligonucleotides has functional consequences, reducing leukocyte adherence.
Abstract:
Intercellular adhesion molecule 1 (ICAM-1) is a glycoprotein expressed on the surface of both hemopoietic and nonhemopoietic cells that mediates, in part, the emigration of leukocytes out of the vasculature. Expression of ICAM-1 on the surface of human umbilical vein endothelial cells and a human lung carcinoma cell line (A549) was increased by interleukin-1 beta, tumor necrosis factor alpha, and interferon gamma in a concentration-dependent manner. Phosphorothioate antisense oligonucleotides designed to hybridize to 10 target sites on the human ICAM-1 mRNA were tested for inhibition of ICAM-1 expression in both cell lines by an ICAM-1 enzyme-linked immunosorbent assay. Based upon potency and unique mRNA target sites, two oligonucleotides were studied in greater detail: ISIS 1570, which targeted the AUG translation initiation codon, and ISIS 1939, which targeted specific sequences in the 3'-untranslated region of the mRNA. Both oligonucleotides specifically inhibit expression of ICAM-1 as analyzed by immunoprecipitation of 35S-labeled proteins. Treatment of cells with ISIS 1939 promoted a reduction in ICAM-1 mRNA, whereas ISIS 1570 did not change the level of ICAM-1 mRNA, suggesting that the two oligonucleotides may be inhibiting ICAM-1 expression by two different mechanisms. The activity of both oligonucleotides was blocked by hybridization of the oligonucleotide to its complementary sense strand prior to addition to the cells. Neither ISIS 1570 nor ISIS 1939 changed the transcriptional rate of the ICAM-1 gene, demonstrating that both oligonucleotides were working through a post-transcriptional mechanism. 2'-O-Methyl phosphorothioate analogs, which do not support RNase H-mediated cleavage of target mRNA, were used to determine if the active antisense oligonucleotides inhibited ICAM-1 expression by an RNase H-dependent mechanism. The 2'-O-methyl phosphorothioate analog of ISIS 1939 did not significantly reduce interleukin-1 beta-induced ICAM-1 expression, whereas the 2'-O-methyl phosphorothioate analog of ISIS 1570 did inhibit ICAM-1 expression, suggesting that the reduction of ICAM-1 mRNA following treatment with ISIS 1939 was due, in part, to RNase H-mediated hydrolysis. Adherence of HL-60 cells to human umbilical vein cell monolayers was inhibited by ISIS 1570 and ISIS 1939, demonstrating that the reduced levels of ICAM-1 impact on ICAM-1-associated function.
Related Concept Videos
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
siRNA - Small Interfering RNAs
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the ATP-dependent...
Experimental RNAi
Cell Adhesion Molecules - Types and Functions
CAM Families
The Integrin family of proteins is primarily involved in a...
Immunoglobulin-like Cell Adhesion Molecules
Ig-CAMs exhibit either homophilic binding (to other Ig-CAMs) or heterophilic binding (to other ligands such as integrins). While most Ig-CAMs...
Inhibitors of Viral Protein Synthesis


