拡張可能なDNAの繰り返しと人間の病気
1Department of Biology, Tufts University, Medford, Massachusetts 02155, USA. sergei.mirkin@tufts.edu
Nature
|June 22, 2007
まとめ
拡張されたDNAの繰り返しは,細胞のプロセスを破壊することによって,約30の遺伝性疾患を引き起こす. これらの繰り返される拡張は,しばしばコード化しない遺伝子領域で,遺伝子発現を変化させ,異常なトランスクリプト構造を通して病気の病原性を駆動します.
科学分野:
- 遺伝学と分子生物学について
- 人間の遺伝性疾患 遺伝性疾患
- ゲノム不安定性について
背景:
- 約30のヒト遺伝疾患は,単純な繰り返しDNA配列の拡張と関連しています.
- これらの繰り返しのDNA配列は,DNAの複製,修復,再結合に干渉する異常な構造特性を有しています.
- 拡張されたDNAの繰り返しにより,ヒト細胞の遺伝子発現が変化し,疾患の発症に寄与する可能性があります.
研究 の 目的:
- 拡張されたDNAの繰り返しが遺伝的疾患を引き起こすメカニズムを調査する.
- ゲノム不安定性におけるDNAの繰り返しの異常な構造的特徴の役割を理解する.
- 特に非コーディング遺伝子の領域における繰り返し拡大が,病気の病原化にどのように寄与するかを解明する.
主な方法:
- 遺伝性疾患を有する個体におけるゲノムDNA構造の分析.
- 細胞複製,修復,再結合機構の相互作用と拡張された繰り返しの調査.
- ヒト細胞の拡張されたDNAの繰り返しによって引き起こされる遺伝子発現の変化の研究.
主要な成果:
- DNAの複製に異常な構造的特徴が特定され,それがDNAの拡張を誘発する.
- 拡張されたDNAの繰り返しが,細胞の重要なDNA維持プロセスを破壊することを示した.
- 拡張された繰り返しによる遺伝子発現の有意な変化が観察されました,特に非コーディング領域です.
結論:
- 拡張されたDNAの重複は,多くの遺伝性疾患の重要な原因である.
- これらの繰り返しの構造的特異性は,それらの拡大と,その後の細胞機械の破壊の鍵です.
- リピートを含むトランスクリプトの特殊な構造は,これらの疾患の病原性において中心的な役割を果たします.
関連する概念動画
Non-LTR Retrotransposons
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
Genome Copying Errors
DNA replication is a well-evolved process that copies millions of base pairs with high fidelity during each cell division. Occasionally a wrong base or a long stretch of wrong bases may get added to the daughter strands. If the errors are left unchecked, cells might accumulate several mutations that might endanger their survival. Therefore, the copying errors are checked and repaired at three levels.
Gene Duplication and Divergence
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are characterized.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are characterized.
Exon Recombination
The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes.
Exon shuffling follows “splice frame rules.” Each exon has three reading...
Exon shuffling follows “splice frame rules.” Each exon has three reading...
Comparing Copy Number Variations and SNPs
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Genome-wide Association Studies-GWAS
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...


