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相关概念视频

RNA Editing02:23

RNA Editing

9.1K
RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
9.1K
Ribosome Profiling02:24

Ribosome Profiling

3.6K
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
3.6K
RNA Interference01:23

RNA Interference

26.1K
RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
26.1K
Experimental RNAi02:15

Experimental RNAi

6.2K
RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
6.2K

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相关实验视频

Updated: Jul 26, 2025

A Nonsequencing Approach for the Rapid Detection of RNA Editing
08:50

A Nonsequencing Approach for the Rapid Detection of RNA Editing

Published on: April 21, 2022

2.6K

使用小分子诱导的RNA编辑来分析动态RNA-蛋白相互作用.

Kyung W Seo1, Ralph E Kleiner2

  • 1Department of Chemistry, Princeton University, Princeton, NJ, USA.

Nature chemical biology
|June 22, 2023
PubMed
概括

我们开发了TRIBE-ID来跟踪动态RNA-蛋白相互作用. 这种方法揭示了压力颗粒如何加强现有的RNA-蛋白结合,并确定了新的结合事件,帮助RBP功能研究.

科学领域:

  • 分子生物学分子生物学
  • 生物化学 生物化学
  • 细胞生物学 细胞生物学

背景情况:

  • RNA结合蛋白 (RBPs) 对于细胞过程至关重要.
  • 了解动态RNA-蛋白相互作用是RBP功能的关键.
  • 现有的方法缺乏时间控制来研究这些相互作用.

研究的目的:

  • 开发一种简单的策略来量化特定状态的RNA-蛋白相互作用.
  • 用时间控制来描述动态RNA-蛋白相互作用.
  • 描述RBP-RNA结合的小分子调节剂.

主要方法:

  • 开发的RBPs目标通过编辑诱导通过二元化 (TRIBE-ID) 识别.
  • 利用了拉巴胺素介导的化学诱导二分化和RNA编辑.
  • 在正常和氧化应激条件下,将TRIBE-ID应用于G3BP1和YBX1.

主要成果:

  • 压力颗粒的形成加强了先前存在的RNA-蛋白相互作用.
  • 压力颗粒的形成会诱导新的RNA-蛋白结合事件.
  • G3BP1稳定其目标独立于应力颗粒的形成.

更多相关视频

RNA Catalyst as a Reporter for Screening Drugs against RNA Editing in Trypanosomes
09:19

RNA Catalyst as a Reporter for Screening Drugs against RNA Editing in Trypanosomes

Published on: July 22, 2014

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An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA
07:55

An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA

Published on: February 17, 2023

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相关实验视频

Last Updated: Jul 26, 2025

A Nonsequencing Approach for the Rapid Detection of RNA Editing
08:50

A Nonsequencing Approach for the Rapid Detection of RNA Editing

Published on: April 21, 2022

2.6K
RNA Catalyst as a Reporter for Screening Drugs against RNA Editing in Trypanosomes
09:19

RNA Catalyst as a Reporter for Screening Drugs against RNA Editing in Trypanosomes

Published on: July 22, 2014

8.5K
An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA
07:55

An Optimized Quantitative Pull-Down Analysis of RNA-Binding Proteins Using Short Biotinylated RNA

Published on: February 17, 2023

3.8K

结论:

  • TRIBE-ID提供了一个概括的方法来描述动态RNA-蛋白相互作用.
  • 该方法允许在细胞环境中进行时间控制.
  • G3BP1-RNA结合的特征小分子调节剂.