Coordinated regulation of replication protein A activities by its subunits p14 and p32

Klaus Weisshart1, Pavel Pestryakov, Richard W P Smith

  • 1Institute of Molecular Biotechnology, Beutenbergstrasse 11, Jena 07745, Germany.

Insights

Replication protein A (RPA) requires all three subunits for efficient DNA binding and replication. Removing the smallest subunit (p14) impairs DNA polymerase interactions and SV40 DNA replication.

Area of Science:

  • Molecular Biology
  • Biochemistry
  • Genetics

Background:

  • Replication protein A (RPA) is crucial for DNA metabolism and signaling in eukaryotes.
  • The precise role of RPA's smallest subunit, p14, remains largely undetermined.
  • Understanding RPA subunit functions is key to elucidating DNA replication mechanisms.

Purpose of the Study:

  • To investigate the function of the smallest RPA subunit, p14.
  • To characterize a dimeric RPA complex (RPADeltap14) lacking p14.
  • To determine the necessity of all three RPA subunits for DNA replication.

Main Methods:

  • Production and characterization of a p14-deficient RPA complex (RPADeltap14).
  • Analysis of single-stranded DNA binding affinity and mode.
  • Assessment of primer-template junction recognition and DNA polymerase interactions.
  • Evaluation of RPADeltap14's ability to support SV40 DNA replication in vitro.

Main Results:

  • RPADeltap14 exhibited altered single-stranded DNA binding compared to the heterotrimeric complex.
  • The p14 and p32 subunits cooperate to stabilize the p70 subunit.
  • RPADeltap14 could not support cell-free SV40 DNA replication, failing in primer synthesis and elongation.
  • Despite supporting DNA unwinding and interacting with SV40 T antigen and DNA polymerase alpha-primase, RPADeltap14 was insufficient for replication.

Conclusions:

  • All three subunits of RPA are essential for efficient binding and proper positioning on single-stranded DNA.
  • The p14 subunit plays a critical role in supporting DNA replication, particularly primer synthesis and elongation.
  • The study highlights the indispensable nature of the complete heterotrimeric RPA complex for eukaryotic DNA replication.

Related Concept Videos

Restarting Stalled Replication Forks02:37

Restarting Stalled Replication Forks

DNA replication is initiated at sites containing predefined DNA sequences known as origins of replication. DNA is unwound at these sites by the minichromosome maintenance (MCM) helicase and other factors such as Cdc45 and the associated GINS complex.The unwound single strands are protected by replication protein A (RPA) until DNA polymerase starts synthesizing DNA at the 5’ end of the strand in the same direction as the replication fork. To prevent the replication fork from falling apart, a...
The Replisome03:01

The Replisome

DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
The Replisome03:01

The Replisome

DNA replication is carried out by a large complex of proteins that act in a coordinated matter to achieve high-fidelity DNA replication. Together this complex is known as the DNA replication machinery or the replisome.
The synthesis of the leading and lagging strands is a highly coordinated process. To explain this, the “Trombone model” was proposed by Bruce Alberts in 1980. The DNA loop formation starts when a primer is synthesized on the parent lagging strand. The loop grows with the...
Negative Regulator Molecules01:23

Negative Regulator Molecules

Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
DNA Damage can Stall the Cell Cycle02:36

DNA Damage can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...
DNA Damage Can Stall the Cell Cycle02:36

DNA Damage Can Stall the Cell Cycle

In response to DNA damage, cells can pause the cell cycle to assess and repair the breaks. However, the cell must check the DNA at certain critical stages during the cell cycle. If the cell cycle pauses before DNA replication, the cells will contain twice the amount of DNA. On the other hand, if cells arrest after DNA replication but before mitosis, they will contain four times the normal amount of DNA. With a host of specialized proteins at their disposal,cells must use the right protein at...