Related Experiment Video
Updated: Aug 4, 2026

09:20
In situ Subcellular Fractionation of Adherent and Non-adherent Mammalian Cells
Published on: July 23, 2010
Human papillomavirus 16 E7 protein is associated with the nuclear matrix
I Greenfield1, J Nickerson, S Penman
1Department of Pathology, University of Cambridge, United Kingdom.
Summary
The human papillomavirus (HPV)-16 E7 protein localizes to the nuclear matrix within cancer cells. This finding explains why E7 was previously difficult to visualize, suggesting epitope masking rather than low protein levels.
Area of Science:
- Oncology
- Virology
- Cell Biology
Background:
- Human papillomavirus (HPV) infection is a major cause of cervical cancer.
- The HPV-16 E7 oncoprotein is a key factor in viral oncogenesis.
- Understanding the cellular localization of E7 is crucial for comprehending its role in cancer development.
Purpose of the Study:
- To determine the precise cellular localization of the HPV-16 E7 gene product.
- To investigate the reasons for previous difficulties in visualizing E7 within cells.
Main Methods:
- Biochemical and immunocytochemical analyses were performed on CaSki and SiHa cell lines.
- A sequential fractionation procedure isolated the nuclear matrix and intermediate filaments (NM-IF) fraction.
- Monoclonal antibodies (mAbs) against E7 were used for immunostaining and Western blotting.
Main Results:
- HPV-16 E7 protein was localized to the nuclear matrix within the nucleus of CaSki and SiHa cells.
- E7 was detected in the NM-IF fraction, but not in HPV-negative cells.
- Immunostaining revealed punctate nuclear fluorescence, indicating E7's specific nuclear association.
Conclusions:
- The HPV-16 E7 protein is predominantly localized to the nuclear matrix.
- Epitope masking by cellular components, not low protein levels, likely explains previous visualization challenges.
- This localization provides insights into E7's function in HPV-driven carcinogenesis.
Related Concept Videos
Non-LTR Retrotransposons
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
Initiation of Translation
Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
Leaky Scanning
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Mechanisms of Retrovirus-induced Cancers
Retroviruses are RNA viruses that have been shown to cause cancers in diverse species, including chickens, mice, cats, and monkeys. The RNA genomes of these viruses are first reverse-transcribed into single and then double-stranded DNA (dsDNA) copies. This dsDNA called proviral DNA then integrates into the host genome. Subsequently, the host cell transcribes the proviral DNA in concert with the chromosomal DNA. This leads to the production of viral RNA and proteins that assemble at the host...
Rous Sarcoma Virus (RSV) and Cancer
Rous Sarcoma virus or RSV was discovered by F. Peyton Rous in the year 1911 as a filterable transmissible agent that could cause tumors in chickens. He won a Nobel Prize for this discovery in 1966. His experiments clearly demonstrated that some cancers could be caused by infectious agents and led to the discovery of many more cancer-causing viruses in animals as well as humans.
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
Inhibitors of Virion Maturation and Assembly
As part of their replication cycle, certain viruses synthesize long precursor proteins called polyproteins within infected host cells. In human immunodeficiency virus (HIV), two major polyproteins are produced: Gag and Gag-Pol. The Gag polyprotein supplies the structural components of the virus, while Gag-Pol includes essential viral enzymes such as reverse transcriptase, integrase, and protease. After synthesis, these polyproteins move to the host cell membrane, where they assemble into an...

