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High-throughput Fluorometric Measurement of Potential Soil Extracellular Enzyme Activities
Published on: November 15, 2013
[Not Available].
1Division of Oral Biology and Medicine, UCLA School of Dentistry, Los Angeles, California 90095, USA.
The Open Dentistry Journal
|June 23, 2009
Summary
The liquid phase of human saliva contains bacterial nucleic acids, reflecting the oral microbiota. This finding suggests the cell-free saliva supernatant provides insights into oral bacteria composition.
Area of Science:
- Microbiology
- Molecular Biology
- Genomics
Background:
- Human saliva separates into cellular and liquid phases via centrifugation.
- The cellular phase is known to harbor oral bacteria, but the liquid phase's microbial content is poorly understood.
Purpose of the Study:
- To investigate the presence and correlation of bacterial nucleic acids in the cell-free liquid phase of human saliva.
- To determine if the liquid phase reflects the oral microbiota composition found in the cellular phase.
Main Methods:
- Analysis of bacterial 16S ribosomal DNA (rDNA) and 16S ribosomal RNA (rRNA) in saliva liquid phase using universal bacterial primers.
- Polymerase chain reaction (PCR) amplification and sequencing of 16S rDNA from the liquid phase.
- Denaturing gradient gel electrophoresis (DGGE) to compare microbial profiles between liquid and cellular phases.
Main Results:
- Significant amounts of bacterial 16S rRNA and rDNA were detected in the cell-free saliva liquid phase.
- Sequencing identified 15 operational taxonomic units (OTUs) from the liquid phase amplicons.
- DGGE analysis revealed a strong positive correlation (Pearson Correlation=0.822, P<0.001) between microbial profiles of the liquid and cellular phases.
Conclusions:
- The liquid phase of human saliva contains abundant bacterial nucleic acids.
- These nucleic acids in the liquid phase correlate with the bacteria present in the cellular phase of saliva.
- The cell-free saliva supernatant can serve as a source of information about the oral microbiota.