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Published on: October 13, 2015
[Variability of the INV gene fragment encoding a functionally important domain of Yersinia pseudotuberculosis
Abstract:
A total of 84 Y. pseudotuberculosis isolates were studied. The isolates were obtained in Russian Federation in 1967-2008. The majority of Y. pseudotuberculosis isolates (n = 55) were of clinical origin and were isolated from feces of patients with the clinically and serologically proved diagnosis of pseudotuberculosis/Far East scarlet-like fever. These isolates included 18 isolates obtained from 3 outbreaks. Nine isolates were isolated from the internal organs of wild rodents. Other isolates were obtained from environmental sources. Ten Y. pseudotuberculosis isolates belonged to the serovar III and the other isolates belonged to the serovar I. The sequences of 600 b.p. fragment of the inv gene that encodes 667 through 866 invasin amino acids were determined for all isolates. Totally, 3 allelic variants were found. The most abundant allele 1 was found in 76 isolates. The allele 1 is represented in the database Genbank by the strain IP31758 isolated in the Far East of Russia (Eppinger et al., 2007). The allele 2 differed from allele 1 in 3 positions: G,2299N, O2300N, and O2302N. Substitutions in positions 2299 and 2302 were non-synonymous and resulted in amino acid substitutions Ser768 Thr and Val769 Ala. Six isolates carried allele 2. Allele 3 was found in two isolates different from allele 2 by a synonymous substitution G2324O. This allele is similar to the sequence found in Y. pestis strains, represented in the GenBank. The allelic distribution was not serovar specific: Y. pseudotuberculosis of serovar III and majority of serovar I isolates carried allele 1. The analysis of the allelic distribution among subpopulations formed on the base of a source of isolation revealed a statistically significant difference in spreading of alleles among clinical and wild rodent isolates (p < 0.05). Allele 1 prevailed over clinical isolates (95%), while allele 1 and allele 2 were disseminated equally among rodent isolates (55 % and 45 %, respectively).
Insights
This study analyzed Yersinia pseudotuberculosis inv gene alleles in Russian isolates. Allele 1 was most common overall, but allele distribution differed significantly between clinical and wild rodent Y. pseudotuberculosis isolates.
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Context:
- Yersinia pseudotuberculosis is a significant human pathogen causing pseudotuberculosis and Far East scarlet-like fever.
- Understanding the genetic diversity of Y. pseudotuberculosis is crucial for tracking outbreaks and disease transmission.
- This study focuses on isolates collected in the Russian Federation between 1967 and 2008.
Purpose:
- To investigate the allelic variations within a specific fragment of the Y. pseudotuberculosis inv gene.
- To determine the distribution of these inv gene alleles among different Y. pseudotuberculosis subpopulations based on origin (clinical, environmental, wild rodents) and serovar.
- To analyze potential correlations between inv gene allelic variants and the source of Y. pseudotuberculosis isolation.
Summary:
- Eighty-four Yersinia pseudotuberculosis isolates from the Russian Federation were analyzed for variations in a 600 bp fragment of the inv gene.
- Three distinct allelic variants were identified, with allele 1 being the most prevalent (76 isolates).
- A statistically significant difference was observed in allele distribution between clinical isolates (95% allele 1) and wild rodent isolates (55% allele 1, 45% allele 2).
Impact:
- The findings highlight a significant genetic differentiation in Y. pseudotuberculosis populations based on their isolation source, suggesting distinct evolutionary or epidemiological trajectories.
- This research contributes to a deeper understanding of Y. pseudotuberculosis population structure and the genetic factors influencing its epidemiology.
- The study provides valuable data for future epidemiological surveillance and the development of targeted control strategies for Yersinia pseudotuberculosis infections.
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