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Highly multiplexed antibody suspension bead arrays for plasma protein profiling
Kimi Drobin1, Peter Nilsson, Jochen M Schwenk
1Science for Life Laboratory Stockholm, School of Biotechnology, KTH-Royal Institute of Technology, Stockholm, Sweden.
Methods in Molecular Biology (Clifton, N.J.)
|June 15, 2013
Summary
This study introduces a bead-based antibody array for high-throughput protein profiling in biological fluids. The assay detects proteins at pico-molar levels, enabling analysis of 384 samples for 384 proteins simultaneously.
Area of Science:
- Biochemistry
- Proteomics
- Analytical Chemistry
Background:
- Antibody microarrays are valuable for protein screening in complex biological samples.
- Directly labeled sample application offers a high-throughput alternative to traditional sandwich assays.
- Suspension bead arrays provide a microtiter plate-based format for flexible screening.
Purpose of the Study:
- To develop and validate a bead-based antibody array system for protein profiling.
- To enable high-throughput analysis of protein expression in body fluids.
- To establish a robust assay for detecting low-abundance proteins.
Main Methods:
- Development of a suspension antibody array using color-coded beads.
- Established a procedure for analyzing biotinylated samples without excess label removal.
- Utilized a microtiter plate format for parallel sample processing.
Main Results:
- The assay system achieves detection limits in the lower pico-molar and higher pg/ml range.
- Demonstrated dynamic ranges spanning over three orders of magnitude.
- The workflow supports profiling of 384 samples for up to 384 proteins per assay.
Conclusions:
- The bead-based antibody array is a powerful tool for systematic, high-throughput protein profiling.
- This method facilitates flexible exploration of protein profiles in large sample cohorts.
- The assay offers sensitive and quantitative analysis of protein expression in biological fluids.

