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Deep Learning-Based Segmentation of Cryo-Electron Tomograms
Published on: November 11, 2022
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Automatic iceball segmentation with adapted shape priors for MRI-guided cryoablation.
Xinyang Liu1, Kemal Tuncali, William M Wells
1Department of Radiology, Brigham and Women's Hospital and Harvard Medical School, Boston, Massachusetts, USA.
Journal of Magnetic Resonance Imaging : JMRI
|December 17, 2013
Summary
An automated method accurately segments the iceball during MRI-guided cryoablation, improving monitoring of kidney tumor treatments. This technique offers robust 3D iceball configuration extraction for clinical application.
Area of Science:
- Medical Imaging
- Interventional Radiology
- Computational Pathology
Background:
- MRI-guided cryoablation is a minimally invasive treatment for kidney tumors.
- Accurate monitoring of the iceball's 3D configuration is crucial for effective cryoablation.
- Current methods for iceball segmentation can be time-consuming and subjective.
Purpose of the Study:
- To develop and evaluate an automated segmentation method for extracting the 3D iceball configuration during MRI-guided cryoablation.
- To assess the accuracy and robustness of the proposed method using intraprocedural MRI data.
Main Methods:
- Retrospective analysis of 63 timepoints from 13 kidney tumor cryoablation procedures using a 3 Tesla MRI scanner.
- Automatic iceball segmentation employing the graph cut (GC) technique with adapted shape priors, initialized with semiautomatically localized cryoprobes.
Main Results:
- High average Dice Similarity Coefficients (DSC) achieved, reaching 0.93 at later timepoints and an overall average of 0.92 ± 0.03.
- The method demonstrated significant accuracy improvement compared to approaches without shape prior adaptation (P=0.026).
- Segmentation results were unaffected by the number of cryoprobes, and average computation time was 20 seconds, suitable for intraprocedural use.
Conclusions:
- The developed automatic iceball segmentation method is highly accurate and robust.
- This technique is suitable for practical intraprocedural monitoring of MRI-guided cryoablation progress.
- The automated approach enhances the precision and efficiency of cryoablation monitoring.

