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A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts
Published on: September 20, 2018
Nora: A Vocabulary Discovery Tool for Concept Extraction.
Guy Divita1, Marjorie E Carter1, B S Begum Durgahee1
1VA Salt Lake City Health Care System & University of Utah, Salt Lake City, Utah, USA.
Nora, an interactive tool, enhances medical vocabularies by discovering new terms from text. This improves natural language processing (NLP) concept extraction, boosting domain lexicon coverage.
Area of Science:
- Medical Informatics
- Natural Language Processing
- Computational Linguistics
Background:
- Controlled medical vocabularies have limited coverage of domain-specific terms.
- Augmenting these terminologies is a resource-intensive process.
- Existing natural language processing (NLP) concept extraction methods can be hindered by incomplete lexicons.
Purpose of the Study:
- To develop an interactive tool, Nora, for discovering and augmenting domain-specific terminology from text corpora.
- To enhance the performance of NLP-based concept extraction tasks through improved terminology resources.
Main Methods:
- Nora visualizes word chains derived from text corpus word frequency indexes.
- Domain experts curate these chains to identify relevant terms and lexical variants.
- The tool facilitates interactive exploration and refinement of terminology.
Main Results:
- Nora demonstrated a 38% increase in the domain lexicon for homelessness and related psychosocial factors.
- This expansion in terminology led to an additional 10% in extracted concepts.
- The tool's interactive approach proved effective in identifying and curating lexical variants.
Conclusions:
- Nora is an effective interactive tool for discovering and expanding domain-specific terminologies.
- The tool enhances NLP concept extraction by enriching medical vocabularies.
- This approach offers a resource-efficient method for terminology augmentation in specialized domains.
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