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Fixed Target Serial Data Collection at Diamond Light Source
Published on: February 26, 2021
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Automated data collection and real-time data analysis suite for serial synchrotron crystallography
Shibom Basu1, Jakub W Kaminski1, Ezequiel Panepucci1
1Swiss Light Source, Paul Scherrer Institute, 5232 Villigen PSI, Switzerland.
Journal of Synchrotron Radiation
|January 19, 2019
Summary
The DA+ software suite enhances serial synchrotron crystallography (SSX) data collection and analysis at the Swiss Light Source. This enables efficient, high-throughput measurements and real-time data processing for macromolecular crystallography (MX) experiments.
Area of Science:
- Structural Biology
- Crystallography
- Biophysics
Background:
- Macromolecular crystallography (MX) is crucial for determining protein structures.
- Serial synchrotron crystallography (SSX) enables high-throughput structure determination from microcrystals.
- Efficient data acquisition and processing are essential for SSX success.
Purpose of the Study:
- To present the DA+ software suite for enhanced serial synchrotron crystallography (SSX) data collection and analysis.
- To highlight the integration of automated data processing and merging for MX experiments.
- To improve the efficiency and throughput of SSX experiments at the Swiss Light Source.
Main Methods:
- Development and implementation of the DA+ data acquisition and analysis software suite.
- Utilizing a 2D grid scan method for microcrystal localization.
- Employing the CY+ GUI for assessment and automated data collection (minisets).
- Adapting automated data processing (adp) and automatic data merging (adm) routines for SSX data.
- Integration with MX MongoDB database and web-based tracker for real-time feedback.
Main Results:
- The SSX suite facilitates easy, efficient, and high-throughput measurements.
- Automated data processing (adp) provides near real-time analysis of SSX data.
- Automatic data merging (adm) with the sxdm package optimizes data quality.
- On-the-fly experimental feedback is provided through a web-based tracker.
Conclusions:
- The DA+ software suite significantly improves SSX data collection and analysis efficiency.
- Automated processing and merging enhance the throughput and quality of structural data.
- Real-time feedback mechanisms empower users to optimize SSX experiments effectively.
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