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Updated: Dec 27, 2025

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Published on: October 28, 2018
Comparing strategies for deep astigmatism-based single-molecule localization microscopy
Marijn Siemons1, Bas M C Cloin1, Desiree M Salas1
1Cell Biology, Neurobiology and Biophysics, Department of Biology, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands.
Adaptive optics with oil immersion objectives significantly enhance deep 3D single-molecule localization microscopy (SMLM) imaging in watery samples, overcoming optical aberrations for nanometric resolution.
Area of Science:
- Biophysics
- Optical Microscopy
- Nanotechnology
Background:
- Single-molecule localization microscopy (SMLM) achieves nanometric resolution in fluorescence microscopy.
- Optical aberrations limit SMLM depth penetration in aqueous samples, especially with high numerical aperture (NA) oil immersion (OI) objectives.
- Adaptive optics (AO) and water immersion (WI) objectives are potential solutions for deep SMLM.
Purpose of the Study:
- To compare the effectiveness of WI and OI objectives, with and without AO, for SMLM at various depths.
- To evaluate astigmatism-based 3D localization encoding using a cylindrical lens versus a deformable mirror (DM).
- To determine the optimal configuration for deep 3D SMLM.
Main Methods:
- Comparative SMLM imaging in aqueous samples at different depths.
- Utilized oil immersion (OI) and water immersion (WI) objectives.
- Employed adaptive optics (AO) with a deformable mirror (DM) and a cylindrical lens for aberration correction and z-encoding.
Main Results:
- OI objectives combined with AO significantly improved localization precision compared to WI-based imaging.
- Deep (>10 µm) 3D localization was successfully achieved using OI with AO.
- Both cylindrical lens and DM enabled astigmatism-based z-encoding, with AO offering superior performance.
Conclusions:
- Adaptive optics is crucial for achieving high-precision, deep 3D SMLM in aqueous environments.
- Oil immersion objectives coupled with AO provide superior performance for deep SMLM over water immersion objectives.
- AO-based aberration correction and z-encoding are essential for advancing SMLM applications in biological imaging.
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