Novel ACADVL variants resulting in mitochondrial defects in long-chain acyl-CoA dehydrogenase deficiency
Ting Chen1,2, Fan Tong1, Xiao-Yu Wu2
1Division of Medical Genetics and Genomics, The Children's Hospital, Zhejiang University School of Medicine / National Clinical Research Center for Child Health, Hangzhou 310052, China.
Insights
Novel variants in very-long-chain acyl-CoA dehydrogenase (VLCAD) deficiency cause mitochondrial defects and increased cell death. Understanding these genetic changes improves diagnosis and treatment strategies for this heterogeneous metabolic disorder.
Area of Science:
- Biochemistry
- Molecular Biology
- Genetics
Background:
- The pathogenesis of very-long-chain acyl-CoA dehydrogenase (VLCAD) deficiency is poorly understood and highly variable.
- Newly identified genetic variants require characterization to elucidate their functional impact.
Purpose of the Study:
- To investigate the molecular and cellular consequences of six novel missense variants associated with mild VLCAD deficiency.
- To understand the biochemical effects and structural implications of these previously unreported VLCAD variants.
Main Methods:
- Functional assessment of fatty acid oxidation (FAO) in patient-derived cells.
- Analysis of mitochondrial function, including respiratory chain activity and ATP production.
- Evaluation of reactive oxygen species (ROS) levels, apoptosis, and protein stability.
- Molecular dynamics (MD) simulations to predict structural changes in mutant VLCAD.
Main Results:
- All six novel variants caused significant deficiencies in FAO and mitochondrial dysfunction.
- Cells with mutant VLCAD exhibited reduced ATP production, increased mitochondrial ROS, and higher apoptosis under stress.
- MD simulations indicated altered homodimer stability and conformational changes in mutant VLCAD structures.
Conclusions:
- These novel VLCAD variants impair crucial cellular functions, contributing to disease heterogeneity.
- The findings offer insights into the molecular basis of VLCAD deficiency, aiding in diagnosis and therapeutic development.
- Understanding these variants is key to improving patient management and comprehending disease variability.
Abstract:
The pathogenesis of very-long-chain acyl-CoA dehydrogenase (VLCAD) deficiency is highly heterogeneous and still unclear. Additional novel variants have been recently detected in the population. The molecular and cellular effects of these previously unreported variants are still poorly understood and require further characterization. To address this problem, we have evaluated the various functions and biochemical consequences of six novel missense variants that lead to mild VLCAD deficiency. Marked deficiencies in fatty acid oxidation (FAO) and other mitochondrial defects were observed in cells carrying one of these six variants (c.541C>T, c.863T>G, c.895A>G, c.1238T>C, c.1276G>A, and c.1505T>A), including reductions in mitochondrial respiratory-chain function and adenosine triphosphate (ATP) production, and increased levels of mitochondrial reactive oxygen species (ROS). Intriguingly, higher apoptosis levels were found in cells carrying the mutant VLCAD under glucose-limited stress. Moreover, the stability of the mutant homodimer was disturbed, and major conformational changes in each mutant VLCAD structure were predicted by molecular dynamics (MD) simulation. The data presented here may provide valuable information for improving management of diagnosis and treatment of VLCAD deficiency and for a better understanding of the general molecular bases of disease variability.
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