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PyPhase - a Python package for X-ray phase imaging
Max Langer1, Yuhe Zhang2, Diogo Figueirinhas3
1Univ Lyon, INSA Lyon, Université Claude Bernard Lyon 1, UJM-Saint Etienne, CNRS, Inserm, CREATIS UMR 5220, U1206, F-69621 Villeurbanne, France.
Journal of Synchrotron Radiation
|July 2, 2021
Summary
PyPhase is a new open-source software package that simplifies X-ray phase retrieval for imaging. It makes advanced techniques accessible for wider use in scientific research.
Area of Science:
- Physics
- Materials Science
- Computational Imaging
Background:
- X-ray imaging techniques, particularly propagation-based methods, are crucial in scientific research.
- Current phase-retrieval algorithms are often instrument-specific and complex, hindering broader adoption.
- The need for accessible and versatile phase-retrieval tools is evident in synchrotron and laboratory-based imaging.
Purpose of the Study:
- To introduce PyPhase, a free and open-source software package for near-field phase reconstruction.
- To provide a modular framework for implementing and developing phase-retrieval algorithms.
- To facilitate the deployment of these algorithms on diverse computational infrastructures, including large-scale facilities.
Main Methods:
- PyPhase implements popular phase-retrieval algorithms within a modular architecture.
- The software supports deployment on high-performance computing resources.
- Algorithm capabilities are demonstrated using experimental data from the MAX IV synchrotron source.
Main Results:
- PyPhase offers a user-friendly and adaptable solution for X-ray phase reconstruction.
- The modular design simplifies the integration and development of new algorithms.
- Successful application to synchrotron data showcases its practical utility and ease of use.
Conclusions:
- PyPhase democratizes access to advanced X-ray phase-retrieval techniques.
- Its open-source nature and modular design foster collaboration and innovation in imaging science.
- The package streamlines the application of phase-retrieval algorithms across different experimental setups.
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