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Updated: Jul 12, 2025

High-Throughput Total Internal Reflection Fluorescence and Direct Stochastic Optical Reconstruction Microscopy Using a Photonic Chip
Published on: November 16, 2019
Super-Resolution-Chip: an in-vitro platform that enables super-resolution microscopy of co-cultures and 3D systems
Ofir Sade1,2, Ronja Boneberg3,4, Yifat Weiss1,5,6
1School of Neurobiology, Biochemistry and Biophysics, The George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel.
Researchers developed the Super-Res-Chip, a novel platform for advanced imaging of cells in 3D cultures. This organ-on-a-chip technology enables super-resolution microscopy (SRM) for studying molecular changes in complex cellular environments.
Area of Science:
- Biotechnology
- Cell Biology
- Microscopy
Background:
- Organs-on-a-chip platforms mimic human physiology for in vitro cell culture.
- Integrating advanced imaging, like super-resolution microscopy (SRM), with these platforms remains challenging.
- Existing SRM-compatible platforms often lack 3D co-culture capabilities or are complex to use.
Purpose of the Study:
- To develop an integrated organs-on-a-chip platform enabling super-resolution microscopy for complex cellular studies.
- To create a user-friendly chip supporting 2D and 3D co-cultures with high-resolution imaging from both sides of a membrane.
- To investigate molecular changes in co-cultured endothelial and epithelial cells using the developed platform.
Main Methods:
- Developed the Super-Res-Chip: a 3D-printed device with a porous membrane for cell co-culture.
- Utilized direct stochastic optical reconstruction microscopy (dSTORM) for molecular imaging.
- Co-cultured endothelial and epithelial cells, including glioblastoma cells, in 2D and 3D configurations.
Main Results:
- The Super-Res-Chip successfully enabled super-resolution microscopy (SRM) on both sides of the membrane.
- High spatial resolution (20-30 nm in xy, 10-20 nm direct) was achieved in both 2D and 3D cultures.
- Analysis of Connexin43 distribution showed differences in cluster density but not in number, size, or radii.
Conclusions:
- The Super-Res-Chip platform facilitates easy characterization of complex cellular processes at the molecular scale.
- This technology enhances the capacity for single-molecule resolution imaging of intricate cellular organizations.
- The platform offers improved capabilities for studying cell-cell interactions and molecular dynamics in physiologically relevant 3D models.
Related Concept Videos
Super-resolution Fluorescence Microscopy
Three-Dimensional Microscopy in Microbiology
Confocal Fluorescence Microscopy
Two-Dimensional Microscopy in Microbiology

