Related Experiment Video
Updated: Apr 28, 2026

Detection of Tissue-resident Bacteria in Bladder Biopsies by 16S rRNA Fluorescence In Situ Hybridization
Published on: October 18, 2019
Deep Learning-Based Culture-Free Bacteria Detection in Urine Using Large-Volume Microscopy
Rafael Iriya1,2, Brandyn Braswell1,3, Manni Mo1,3
1Biodesign Center for Biosensors and Bioelectronics, Arizona State University, Tempe, AZ 85287, USA.
Abstract:
Bacterial infections, increasingly resistant to common antibiotics, pose a global health challenge. Traditional diagnostics often depend on slow cell culturing, leading to empirical treatments that accelerate antibiotic resistance. We present a novel large-volume microscopy (LVM) system for rapid, point-of-care bacterial detection. This system, using low magnification (1-2×), visualizes sufficient sample volumes, eliminating the need for culture-based enrichment. Employing deep neural networks, our model demonstrates superior accuracy in detecting uropathogenic Escherichia coli compared to traditional machine learning methods. Future endeavors will focus on enriching our datasets with mixed samples and a broader spectrum of uropathogens, aiming to extend the applicability of our model to clinical samples.
More Related Videos
12:08Rapid Antimicrobial Susceptibility Testing by Stimulated Raman Scattering Imaging of Deuterium Incorporation in a Single Bacterium
Published on: February 14, 2022
12:08Hybrid De Novo Genome Assembly for the Generation of Complete Genomes of Urinary Bacteria using Short- and Long-read Sequencing Technologies
Published on: August 20, 2021
Related Concept Videos
Urine Studies II: Urine Culture and Sensitivity Test
Methods to Assess Microbial Populations
Automated Microbial Diagnostics