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DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
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Related Experiment Video

Updated: Jun 12, 2025

Bioluminescent Optogenetics 2.0: Harnessing Bioluminescence to Activate Photosensory Proteins In Vitro and In Vivo
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A versatile bioluminescent probe with tunable color.

Zachary R Torrey1, Lila P Halbers2, Lorenzo Scipioni3

  • 1Department of Chemistry, University of California Irvine Irvine CA 92697 USA jpresche@uci.edu.

RSC Chemical Biology
|September 23, 2024
PubMed
Summary
This summary is machine-generated.

Researchers developed a new bioluminescence imaging platform, BREAKFAST, for microscale visualization. This tool enables dynamic, multi-color imaging at the cellular level, advancing in vivo studies.

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A Step Beyond BRET: Fluorescence by Unbound Excitation from Luminescence FUEL
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Area of Science:

  • Biotechnology
  • Molecular Imaging
  • Cell Biology

Background:

  • Bioluminescence imaging is valuable for in vivo studies but limited at the microscale due to a lack of versatile tools for dynamic event visualization.
  • Current methods often lack the flexibility required for detailed cellular-level imaging.

Purpose of the Study:

  • To develop a novel platform for microscale bioluminescence imaging.
  • To create a versatile tool for visualizing dynamic biological events with enhanced spectral capabilities.

Main Methods:

  • Development of the Bioluminescence Resonance Energy mAKe over with a Fluorescence-Activating absorption-Shifting Tag (BREAKFAST) platform.
  • Integration of a bright luciferase with a chemogenetic tag (pFAST) for rapid color switching.
  • Utilizing resonance energy transfer with luciferin and fluorogenic ligands for signal detection and spectral analysis.

Main Results:

  • Established the utility of BREAKFAST for combined fluorescence and bioluminescence imaging.
  • Achieved dynamic, four-color visualization through sequential ligand addition and spectral phasor analysis.
  • Demonstrated selective signal quenching using a dark fluorogen, showcasing precise control over imaging signals.

Conclusions:

  • BREAKFAST provides a new method for cellular-scale bioluminescence imaging.
  • This platform enhances the visualization of dynamic events at the microscale.
  • The developed technology lays the groundwork for future advancements in bioluminescence probe development and imaging applications.