Understanding Oxygen "Buffering" by Caveolae Using Coarse-Grained Molecular Dynamics Simulations
1IBiTech - BioMMedA research group, Ghent University, Ghent, Belgium.
Abstract:
The "oxygen paradox" embodies the delicate interplay between two opposing biological processes involving oxygen (O2). O2 is indispensable for aerobic metabolism, fuelling oxidative phosphorylation in mitochondria. However, excess O2 can generate reactive species that harm cells. Thus, maintaining O2 balance is paramount, requiring the prioritisation of its benefits while minimising potential harm. Previous research hypothesised that caveolae, specialised cholesterol-rich membrane structures with a curved morphology, regulate cellular O2 levels. Their role in absorbing and controlling O2 release to mitochondria remains unclear. To address this gap, we aim to explore how the structural features of caveolae, particularly membrane curvature, influence local O2 levels. Using coarse-grained (CG) molecular dynamics simulations, we simulate a caveola-like curved membrane and select a CG bead as the O2 model. Comparing a flat bilayer and a liposome of 10 nm diameter, composed of 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC), allows us to study changes in the O2 free energy profile. Our findings reveal that curvature has a contrasting effect on the free energy of the outer and inner layers. These findings show the membrane curvature's impact on O2 partitioning in the membrane and O2 permeation barriers, paving the way towards our understanding of the role of caveolae curvature in O2 homeostasis.
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