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Updated: Sep 15, 2025

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Development of an Individual-Tree Basal Area Increment Model using a Linear Mixed-Effects Approach
Published on: July 3, 2020
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A tutorial for understanding SEM using R: Where do all the numbers come from?
1Department of Data Analysis, Ghent University, Ghent, Belgium.
Summary
This tutorial demystifies structural equation modeling (SEM) by showing how to manually compute key results like parameter estimates and fit measures using R. It makes complex SEM calculations accessible for researchers.
Area of Science:
- Statistics
- Quantitative Psychology
- Data Science
Background:
- Structural Equation Modeling (SEM) is perceived as complex.
- Understanding SEM's underlying computations in software output is challenging.
- Open-source SEM tools in R exist but their source code can be overwhelming.
Purpose of the Study:
- To provide an accessible introduction to the basic computations behind standard SEM analyses.
- To clarify how SEM software output numbers are computed.
- To enhance reader understanding of SEM's internal workings.
Main Methods:
- Manual reproduction of key SEM results using simple R scripts.
- Utilizing two well-known example datasets for demonstration.
- Focusing on clarity and conceptual understanding over computational efficiency.
Main Results:
- Demonstrated manual computation of parameter estimates.
- Showcased reproduction of standard errors.
- Illustrated the calculation of SEM fit measures.
Conclusions:
- Readers can gain a better grasp of SEM "under the hood" through manual computation.
- This tutorial facilitates applying SEM computational concepts in independent research.
- Demystifies SEM calculations, making the method more approachable for researchers.
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