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Challenges for developing selective viral protease inhibitors as antiinfectives
Claudiu T Supuran1, Luigi Pisano2
1Neurofarba Department, Pharmaceutical and Nutraceutical Section, University of Florence, Florence, Italy.
The Enzymes
|November 14, 2025
Summary
Viral proteases are essential for virus life cycles and are key targets for antiviral drugs. Despite successes with HIV, HCV, and SARS-CoV-2, challenges remain in developing new protease inhibitors for other viruses.
Area of Science:
- Virology
- Drug Discovery
- Biochemistry
Background:
- Viral proteases are critical components of viral replication and have emerged as significant targets for antiviral drug development.
- While effective protease inhibitors (PIs) exist for HIV, HCV, and SARS-CoV-2, many other viruses encoding proteases are now under investigation.
- These include enteroviruses, filoviruses (Zika, Dengue), togaviruses, and hemorrhagic fever viruses, with their proteases being cloned and characterized.
Purpose of the Study:
- To review the current landscape of viral proteases as drug targets.
- To discuss the challenges and innovative strategies in designing novel protease inhibitors (PIs).
- To highlight the potential of PIs against a broader range of viral infections.
Main Methods:
- Review of existing literature on viral proteases and antiviral drug development.
- Analysis of challenges in designing peptidomimetic and non-peptidomimetic PIs.
- Discussion of strategies to overcome issues like selectivity, pharmacokinetics, and drug resistance.
Main Results:
- Over 25 PIs are clinically available for HIV, HCV, and SARS-CoV-2.
- Proteases from numerous other significant viral pathogens have been identified, cloned, and characterized.
- No PIs targeting these emerging viral threats have reached clinical trials yet.
Conclusions:
- Developing novel PIs faces hurdles including complex drug design, selectivity, in vivo efficacy, and resistance.
- Innovative strategies are being explored to address these challenges in antiviral drug discovery.
- Targeting viral proteases remains a promising avenue for combating a wide spectrum of viral diseases.

