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Inhibiting cholesterol synthesis halts rhabdomyosarcoma growth via ER stress and cell cycle arrest
Nebeyu Yosef Gizaw1, Kalle Kolari2, Pauliina Kallio3
1Stem Cells and Metabolism Research Program, Research Programs Unit, Faculty of Medicine, University of Helsinki, 00014, Helsinki, Finland.
Abstract:
Rhabdomyosarcoma (RMS) is the most common pediatric soft tissue sarcoma, with poor outcomes in high-risk and relapsed patients. Here, we identify de novo cholesterol biosynthesis as a critical metabolic vulnerability in RMS. The transcription factor PROX1, previously implicated in RMS growth, acts as an upstream regulator of cholesterol biosynthesis, promoting expression of key pathway genes. Inhibition of cholesterol biosynthesis, either genetically or pharmacologically, impaired RMS cell proliferation, caused a broad halt of cell cycle progression, and activated ER stress-mediated apoptosis through the PERK-ATF4-CHOP axis. Notably, RMS cells could not be rescued by exogenous LDL cholesterol, indicating a unique reliance on endogenous cholesterol production, whereas normal cells, including myoblasts and astrocytes, largely relied on extracellular cholesterol uptake. Clinical and single-cell RNA-seq analyses further revealed that high expression of cholesterol biosynthesis genes correlate with poor survival and enrichment of cell cycle-related gene signatures across RMS subtypes. Together, these findings mechanistically link cholesterol biosynthesis to proliferative signaling and ER stress response in RMS and highlight this pathway as a promising, non-redundant therapeutic target.
Insights
Rhabdomyosarcoma cells exhibit a critical vulnerability in cholesterol production. Inhibiting this pathway halts cancer growth and triggers cell death, offering a novel therapeutic strategy for this pediatric sarcoma.
Area of Science:
- Oncology
- Metabolic Pathways
- Molecular Biology
Background:
- Rhabdomyosarcoma (RMS) is a common pediatric soft tissue sarcoma with poor prognoses in high-risk and relapsed cases.
- Identifying unique metabolic vulnerabilities is crucial for developing effective RMS therapies.
Purpose of the Study:
- To investigate the role of cholesterol biosynthesis as a metabolic vulnerability in Rhabdomyosarcoma.
- To elucidate the regulatory mechanisms and therapeutic potential of targeting cholesterol metabolism in RMS.
Main Methods:
- Investigated the role of transcription factor PROX1 in regulating cholesterol biosynthesis genes.
- Utilized genetic and pharmacological inhibition of cholesterol biosynthesis in RMS cells.
- Analyzed cell proliferation, cell cycle progression, and apoptosis induction (ER stress, PERK-ATF4-CHOP axis).
- Assessed rescue effects of exogenous LDL cholesterol.
- Performed clinical and single-cell RNA-seq analyses on RMS patient samples.
Main Results:
- De novo cholesterol biosynthesis is a critical metabolic vulnerability in RMS, regulated by PROX1.
- Inhibition of cholesterol biosynthesis impaired RMS cell proliferation, arrested cell cycle, and induced apoptosis via ER stress.
- RMS cells showed a unique reliance on endogenous cholesterol production, unlike normal cells.
- High expression of cholesterol biosynthesis genes correlated with poor survival and cell cycle signatures in RMS.
Conclusions:
- Cholesterol biosynthesis is a key driver of proliferation and ER stress response in Rhabdomyosarcoma.
- Targeting endogenous cholesterol production represents a promising, non-redundant therapeutic strategy for RMS.
- PROX1-mediated regulation of cholesterol metabolism is a significant finding for RMS research.
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