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The effective molarity (EM)--a computational approach.

Rafik Karaman1

  • 1Faculty of Pharmacy, Al-Quds University, P.O. Box 20002, Jerusalem, Palestine. dr_karaman@yahoo.com

Bioorganic Chemistry
|May 11, 2010
PubMed
Summary
This summary is machine-generated.

This study computed effective molarity (EM) for intramolecular S(N)2 reactions forming aziridines and epoxides. Calculated EM values strongly correlated with experimental data, enabling prediction for challenging reactions.

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Area of Science:

  • Organic Chemistry
  • Computational Chemistry
  • Reaction Mechanisms

Background:

  • Intramolecular S(N)2 reactions are crucial for synthesizing cyclic compounds like aziridines and epoxides.
  • Determining effective molarity (EM) experimentally can be challenging for certain intramolecular processes.

Purpose of the Study:

  • To compute effective molarity (EM) for 12 intramolecular S(N)2 reactions.
  • To establish a correlation between calculated and experimental EM values.
  • To explore computational methods for predicting EM in difficult-to-study reactions.

Main Methods:

  • Ab initio calculations
  • Density Functional Theory (DFT) methods
  • Computation of effective molarity (EM)

Main Results:

  • A strong correlation was observed between computed and experimentally determined effective molarity (EM) values.
  • The study successfully predicted EM for intramolecular reactions.
  • Calculations identified proximity orientation and strain energies as key driving forces for ring-closing reactions.

Conclusions:

  • Computed effective molarity (EM) can reliably predict experimental values for intramolecular S(N)2 reactions.
  • Computational methods offer a viable alternative for determining EM when experimental data is scarce.
  • Nucleophile-electrophile proximity and product/reactant strain energies are critical factors in these cyclization reactions.