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  1. Home
  2. Cortexcam: A Camera Array Microscope For Cortex-wide Cellular Imaging In Freely Locomoting Mice.
  1. Home
  2. Cortexcam: A Camera Array Microscope For Cortex-wide Cellular Imaging In Freely Locomoting Mice.

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CortexCAM: A Camera Array Microscope for Cortex-Wide Cellular Imaging in Freely Locomoting Mice.

Suhasa Kodandaramaiah, Arun Cherkkil, Zoey Viavattine

    Research Square
    |June 12, 2026

    View abstract on PubMed

    Summary
    This summary is machine-generated.

    Researchers developed the Cortex Camera Array Microscope (CortexCAM) for simultaneous, wide-scale neuronal activity imaging. This system enables studying brain-wide cellular dynamics in freely moving mice during natural behaviors.

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    Area of Science:

    • Systems Neuroscience
    • Neuroimaging
    • Cellular Neuroscience

    Background:

    • Understanding neuronal activity across brain regions during natural behaviors is crucial.
    • Current methods often limit simultaneous imaging to small brain areas or require head-fixed preparations.

    Purpose of the Study:

    • To introduce a novel imaging system, the Cortex Camera Array Microscope (CortexCAM), for large-scale, simultaneous neuronal activity recording.
    • To enable the study of cortex-wide neural dynamics in freely behaving animals during ethologically relevant tasks.

    Main Methods:

    • Developed the Cortex Camera Array Microscope (CortexCAM) integrating four miniaturized fluorescence microscopes.
    • Integrated CortexCAM into a mobile gantry system for volitional motion control (translational and rotational).
    • Enabled imaging of over 9000 neurons across dorsal cortical regions in freely locomoting mice.

    Main Results:

    • Achieved simultaneous, cortex-wide cellular resolution imaging over 48 mm2 of the dorsal cortex.
    • Successfully imaged neuronal activity in motor, somatosensory, visual, retrosplenial, and association cortices.
    • Demonstrated imaging during volitional movement, choice tasks, and social interactions in mice.

    Conclusions:

    • The mobile CortexCAM system facilitates studying brain-wide neural dynamics during naturalistic behaviors.
    • This technology overcomes limitations of head-fixed preparations for systems neuroscience research.
    • Enables novel insights into neural circuits underlying complex behaviors.